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You can use Cookie or LocalStorage concept to store checkbox values. If you are good with HTML 5 then use LocalStorage otherwsie use cookie. And then when page reloads fetch data from cookie/localstorage.
Follow below links:
https://www.sitepoint.com/quick-tip-persist-checkbox-checked-state-after-page-reload/
http://stackoverflow.com/questions/13936865/jquery-save-checkbox-state-on-click-in-cookie